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Omics Data Inventory Specialist
Eingestellt von Radiant systems Inc
Gesuchte Skills: Unix, Support, Bash
Projektbeschreibung
Job Title: Omics Data Inventory Specialist
Duration: ASAP- 6 months (approx.)
Location: Basel, Switzerland
Description:
While some of the Omics data is organized and deposited in structured databases (eg gData), other data is located on the Unix file system in a non uniform way.
Folder structures are inconsistent; Raw, normalized, QC'd, analyzed data and archived data need to be identified and connected.
Meta data assignment for these data is currently patchy.
To ensure access and cataloguing of these data, someone needs to go through this on a case by case basis - programmatically, and in some cases by hand curation.
This is time consuming and support is needed.
Requirements:
Proficient in Unix bash programming
Proficient in R/R shiny programming
Good understanding of omics (RNA-seq, WGS, Exome-seq, etc) and associated file types
We have ambitious timelines and need someone who can fully focus on this task
Duration: ASAP- 6 months (approx.)
Location: Basel, Switzerland
Description:
While some of the Omics data is organized and deposited in structured databases (eg gData), other data is located on the Unix file system in a non uniform way.
Folder structures are inconsistent; Raw, normalized, QC'd, analyzed data and archived data need to be identified and connected.
Meta data assignment for these data is currently patchy.
To ensure access and cataloguing of these data, someone needs to go through this on a case by case basis - programmatically, and in some cases by hand curation.
This is time consuming and support is needed.
Requirements:
Proficient in Unix bash programming
Proficient in R/R shiny programming
Good understanding of omics (RNA-seq, WGS, Exome-seq, etc) and associated file types
We have ambitious timelines and need someone who can fully focus on this task
Projektdetails
Geforderte Qualifikationen
-
Kategorie:
IT Entwicklung, Sonstiges